2016 Publications

Ines Lezcano-Gonza‚lez, Ramon Oord, Mauro Rovezzi, Pieter Glatzel, Stanley W. Botchway, Bert M. Weckhuysen, and Andrew M. Beale, (2016) "Molybdenum Speciation and its Impact on Catalytic Activity during Methane Dehydroaromatization in Zeolite ZSM-5 as Revealed by Operando X-Ray Methods"

 

Salvati, E., Sui, T., Zhang, H., Fong, K.S., Paynter, R.J.H., Song, X., Korsunsky, A.M., (2016), "Fatigue and Fracture behaviour of AZ31b Mg alloy plastically deformed by Constrained Groove Pressing in the Presence of Overloads",Procedia Structural Integrity, 2, 3772-3781

Carvalho, A.L.M.,  Martins, J.P., Salvati, E., Sui, T., Korsunsky, A.M., (2016), "Crack surface morphology and grain misorientation in fatigued aluminium alloy AA7050 samples after interrupted ageing and retrogression-reageing treatments", Procedia Structural Integrity, 2, 3697-3704.

Fu, M.W. , Wang, J.L., Korsunsky, A.M., (2016) “ A review of geometrical and microstructure size effects in micro-scale deformation processing of metallic alloy components”, International Journal of Machine Tools and Manufacture, 109, 94-125.

Lunt, A.J.G., Salvati, E., Ma, L., Dolbyna, I.P., Neo, T.K., Korsunsky, A.M., (2016) "Full in-plane strain tensor analysis using the microscale ring-core FIB milling and DIC approach", J. Mech. Phys. Solids., 94, 47-67.

Salvati, E., Sui, T., Korsunsky, A.M., (2016) "Uncertainty quantification of residual stress evaluation by the FIB–DIC ring-core method due to elastic anisotropy effects", Int. J. Solids. Struct., 87, 61-69.

Kim, T., Song, B., Lunt, A.J.G., Giannantonio Cibin, Andrew J Dent, Li Lu, Korsunsky, A.M., (2016), "In operando X-ray absorption spectroscopy study of charge rate effects on the atomic environment in graphene-coated Li-rich mixed oxide cathode", Mater. Design, 98, 231-242.

Korsunsky, A.M., Sui, T., Salvati, E., George, E.P., Sebastiani, M., (2016) "Experimental and modelling characterisation of residual stresses in cylindrical samples of rapidly cooled bulk metallic glass", Mater. Design, May 2016.

Bowen, C., Ting, V., Sui, T. Korsunsky, A.M., (2016) "Editorial-Virtual special issue on materials for energy efficient transport" , Mater. Design, 97, 444.

McMillan, M.D., Booker, J.D., Smith, D.J., Fedorciuc Onisa, C., Korsunsky, A.M., Song, X., Baimpas, N., Evans, A., (2016),"Analysis of increasing torque with recurrent slip in interference-fits", Eng. Fract. Mech., 62, 58-74.

Salvati, E., O’Connor, S., Sui, T., Nowell, D., Korsunsky, A.M., (2016) "A Study of Overload Effect on Fatigue Crack Propagation Using EBSD, FIB-DIC and FEM Methods", Eng. Fract. Mech., April 2016.

Sun, G., Sui, T., Song, B., Zheng, H., Lu, L., Korsunsky, A.M., (2016), "On the fragmentation of active material secondary particles in lithium ion battery cathodes induced by charge cycling", Extreme Mechanics Letters, March 2016.

Song, S., Sheptyakov, D., Korsunsky, A.M., Duong, H.M. , Lu, L., (2016) "High Li ion conductivity in a garnet-type solid electrolyte via unusual site occupation of the doping Ca ions", Mater. Design, 93, 232-237.

Kartal, M.E., Kang, Y.H., Korsunsky, A.M., Cocks, A.C.F., Bouchard, J.P., (2016) "The influence of welding procedure and plate geometry on residual stresses in thick components", Int. J. Solids. Struct., 80, 420-429.

Salvati, E., Sui, T., Lunt, A.J.G., Korsunsky, A.M., (2016), "The effect of eigenstrain induced by ion beam damage on the apparent strain relief in FIB-DIC residual stress evaluation", Mater. Design, 92, 649-658.

Karana, E., Pedgley, O., Rognoli, V., (2016), "Emerging material experiences", Mater. Design, 90, 1248-1250.

Sui, T., Lunt, A.J.G., Baimpas, N., Sandholzer, M.A., Li, T., Zeng, K., Landini, G., Korsunsky, A.M., (2016) "Understanding Nature’s residual strain engineering at the human dentine-enamel junction interface", Acta Biomater., 32, 256–263.

Carvalho, A.L.M., Martins, J.P., Salvati, E., Sui T., Korsunsky, A.M., (2016) "Fractography of Fatigue Cracks in Aluminium Alloy AA7050 Subjected to Interrupted Ageing and Retro-Ageing Heat Treatments", Proc. IMECS, 2.

Zhang, H., Fong, K.S., Song, X., Ying, S., Salvati, E., Sui, T., Korsunsky, A. M. (2016) "Synchrotron X-ray Diffraction Analysis of Bending Strains in Magnesium Alloy AZ31B Processed by Severe Plastic Deformation", Proc. IMECS, 2.

Dasari, A., Chen, Z., Huang, W.M., Sui, T. Korsunsky, A.M., (2016) "Editorial-Virtual special issue: Recent advances in materials for sports technology", Mater. Design, 99, 592-593.

Song, B., Day, S.J., Sui, T., Lu, L., Tang, C.C., Korsunsky, A.M., (2016) "Mitigated phase transition during first cycle of a Li-rich layered cathode studied by in operando synchrotron X-ray powder diffraction", Phys. Chem., C, 18, 4745-4752.

Zhang, W., Bodey, A.J., Sui, T., Kockelmann, W., Rau, C., Korsunsky, A.M., Mi, J., (2016) "Multi-scale Characterisation of the 3D Microstructure of a Thermally-Shocked Bulk Metallic Glass Matrix Composite", Sci. Rep., 6.

Salvati, E., Benedetti, M., Sui, T., Korsunsky, A.M., (2016) "Residual Stress, Thermomechanics & Infrared Imaging, Hybrid Techniques and Inverse Problems, 9, 275-283."

Lezcano-Gonz‚lez, I., Oord, R., Rovezzi, M.,  Glatzel, P.,  Botchway, S.W., Weckhuysen,
B.M. and Beale A.M., (2016) ""Molybdenum Speciation and its Impact on Catalytic Activity during Methane Dehydroaromatization in Zeolite ZSM-5 as Revealed by Operando X-Ray Methods"" Angew. Chem. Int. Ed. 55, 5215 –5219"

Green, M., Mackenzie, R.C., Hatter, L., Afonso, J.P., Brookes, E.,  Soultanas, P. & Scott, D.J. (2015). Single-stranded DNA Stimulates Compaction of the C-Terminal Domain of SSB Signifying a Novel Mechanism of Action. J.Mol.Biol. 428 357-364

Patel, T.R., Winzor, D.J. & Scott D.J. (2016). Analytical ultracentrifugation: A versatile tool for the characterisation of macromolecular complexes in solution. Methods 95 55-61

ave, C.,  Sutton, G.,  Evans, G.,  Owen, R.,  Rau, Ch.,  Robinson, I.,  and Stuart, D.I.,  (2016) “Imperfection and Radiation Damage in Protein Crystals Studied with Coherent Radiation”, Journal of Synchrotron Radiation, 23 228-237 (2016) doi: 10.1107/S1600577515019700

Chen, B.,  Yusuf, M.,  Hashimoto, T.,  Estandarte, A.,  Thompson, G.,  and Robinson, I.,  (2016)  “Three-Dimensional Positioning and Structure of Chromosomes in a Human Prophase Nucleus”,  submitted to Nature Scientific Reports (2016)

Monteforte, M.,  Kobayashi, S.,  Tung, L.D., Higashimine, K.,  Mott, D.,  Maenosono, S.,  Thanh N.T.K.,  and Robinson, I.K., (2016) “Quantitative Two Dimensional Strain Mapping of Small Core-Shell FePt@Fe3O4 Nanoparticles”, , New Journal of Physics 18 033016 (2016) doi:10.1088/1367-2630/18/3/033016

Estandarte, A.K.,  Botchway, S.,  Lynch, C.,  Yusuf, M.,  and Robinson, I., (2016)  “The use of DAPI fluorescence lifetime imaging for investigating chromatin condensation in human chromosomes”submitted to Nature Scientific Reports

Ihli, J.,  Clark, J.N.,  Côté, A.S.,  Kim, Y.Y.,  Schenk, A.S.,  Kulak, A.N., Comyn, T.P.,  Chammas, O.,  Harder, R.J.,  Duffy, D.M.,  Robinson, I.K.,  Meldrum, F.C., (2016) “The Role of Strain in Controlling Crystallization at Organic Matrices”, accepted in Nature Materials

Robinson, I.,  Yusuf, M., Schwenke, J.,  Estandarte, A.,  Zhang, F.,  Bhella, G.,  Parmar, N.,  Clark, J.,  Song, C., Nam, D.,  Ratnasari, G.,  Kaneyoshi, K.,  Takata, H., and Fukui, K., (2016)  “Damage-free imaging of human chromosomes”,  accepted in Chromosome Science

Yusuf, M., Patel, P.,  Bhella, G.,  Coles, B.,  Mir, K.,  Ward, A.,  Botchway, S.,  and Robinson, I., (2016)  “Development of a microfluidic robotic system to obtain single chromosomes for imaging experiments”, accepted in Chromosome Science

Monteforte, M.,  Estandarte, A.K.,  Chen, B., Harder, R., Huang, M.H.,  and Robinson, I.K., (2016)  “Novel Silica Stabilisation Method for the Analysis of Fine Nanocrystals using Coherent X-ray Diffraction Imaging”,  accepted in Journal of Synchrotron Radiation

Zhang, F.,  Chen, B., Morrison, G.R.,  Guizar-Sicairos, M.,  and Robinson, I.K., (2016) “X-ray Coherent Modulation Imaging”, submitted to Nature Physics

Robinson, I.,  Clark. J.,  and Harder, R., (2016)  “Materials Science in the Time Domain using Bragg Coherent Diffraction Imaging”, Journal of Optics 18 054007
doi:10.1088/2040-8978/18/5/054007"

Schwenke, Jö., Shemilt, L.,  Yusuf, M.,  Wagner, U.,  Morrison, G.,  Zhang, F.,  Parsons, A.,  Robinson, I., (2016) “Quantitative phase measurements of human nuclei using X-ray ptychography”,  in preparation for Acta Cryst A

Schwenke, J.,  Chen, B.,  Shapiro, D., Yusuf, M., Shi, X.,  Parmar, N.,  Bhella, G.,  Robinson, I.K., (2016)  "High-resolution nano-tomography of a human chromosome", in preparation for IUCrJ

Robinson, I.K., Clark, J.N.,  Ihli, J.,  Schenk, A.S.,  Kim, Y.Y.,  Kulak, A.N.,  Campbell, J.M.,  Nisbit, G.,  Meldrum, F.C., (2016)  “How do dislocations shuffle to grow crystals?”,  Diamond Light Source Annual Report

Robinson, I.,  Yang, Y.,  Zhang, F.,  Lynch, C.,  Mohammed, Y.,  and Cloetens, P., (2016)  “Nuclear Incorporation of Iron during the Eukaryotic Cell Cycle”,  submitted to Journal of Synchrotron Radiation

Chen, B.,  Morrison, G.,  Ducic, T.,  Yusuf, M.,  Pérez-Berná, A.J.,  Pereiro E.,  and Robinson, I., (2016)  "Three-Dimensional Fine Structure of Human Chromosomes at Cryogenic Temperature",  in preparation for Nature Cell Biology

Yusuf, M.,  Zhang, F.,   Chen, B., Bhartiya, A.,  Wagner, U.,  Cacho-Nerin, F., Schwenke, J., and Robinson, I.K.,  (2016) “Procedures for Cryogenic X-ray Ptychographic Imaging of Biological Samples”, in preparation for IUCrJ

Liu, X.,  Lin, W.,  Chen, B.,  Zhang, F., Parsons, A., Rau, C.,  and Robinson, I.,  “Coherent Diffraction study of Calcite Nucleation during Cement Hydration”, (2016) in preparation for Materials Design

Diao, J.,  Chen, B.,  Liu, X.,  Luo, Q.,  Shen J.,  and Robinson, I., (2016)  “Nucleation of Fractal Nanocrystallites upon Annealing of Fe-based Metallic Glass”, , in preparation for Journal of Materials Research

Yusuf, M.,  Chen, B.,  and Robinson, I., (2016)  "Future Prospects of 3D Human Chromosome Imaging by Serial Block Face Scanning Electron Microscopy, Single Cell Biology" 5 134-5 (2016) doi:10.4172/2168-9431.1000134

Bradley, R.,  Robinson, I.,  and Yusuf, M., (2016)  “3D Xray nanotomography of cells grown on electrospun scaffolds”,  submitted to Advanced Healthcare Materials

Burdet, N.,  Shi, X.,  Clark, J.N.,  Huang, X.,  Harder, R.,  and Robinson, I.K., (2016)  “Bragg projection ptychography on niobium phase domains”,  in preparation for Physical Review B

Simkovic, F., Thomas, J. M. H., Keegan, R. M., Winn, M. D., Mayans, O. and Rigden, D. J. (2016)  "Residue contacts predicted by evolutionary covariance extend the application of ab initio Molecular Replacement to larger and more challenging protein folds" IUCrJ, 3, in press

Joseph, A.P., Malhotra, S.,  Burnley, T.,  Wood, C.,  Clare, D.K.,  Winn, M.,  and Topf, M.,  (2016) "Refinement of atomic models in high resolution EM reconstructions using Flex-EM and local assessment", Methods, 100, 42-49

Ison, J., Morris, C., et al. (2016) “Tools and data services registry: a community effort to document bioinformatics resources” Nucleic Acids Research, 44, D38-D47   

Waterman, D.G.,  Winter, G., Gildea, R.J.,  Parkhurst, J.M.,  Brewster, A.S.,  Sauter, N.K.,  Evans, G.,  (2016) “Diffraction-geometry refinement in the DIALS framework”  Acta Cryst. D72, 558-575

Metzger, E., Willmann, D., McMillan, J., Forne, I., Metzger, P., Gerhardt, S., Petroll, K., von Maessenhausen, A., Urban, S., Schott, A-K., Espejo, A., Eberlin, A., Wohlwend, D., Schüle, KM., Schleicher, M., Perner, S., Bedford, MT., Jung, M., Dengjel, J., Flaig, R., Imhof, A., Einsle, O., Schüle, R. (2016) “Assembly of methylated KDM1A and CHD1 drives androgen receptor-dependent transcription and translocation” Nature Structural & Molecular Biology 23, 132-139 advance online publication 11 January 2016

Roatsch, M., Robaa, D., Pippel, M., Nettleship, JE., Reddivari, Y., Bird, LE., Hoffmann, I., Franz, H., Owens, RJ., Schüle, R., Flaig, R., Sippl, W., Jung, M. (2016) “Subsituted 2-(2-aminopyrimidin-4-yl)pyridine-4-carboxylates as potent inhibitors of JumonjiC domain-containing histone demethylases” Future Med. Chem. Mar 14, Epub ahead of print.

Asiani, K. R., Williams, H., Bird, L., Jenner, M., Searle, M. S., Hobman., J. L., Scott, D. J. and Soultanas, P. (2016), "SilE is an intrinsically disordered periplasmic “molecular sponge” involved in bacterial silver resistance". Molecular Microbiology. doi:10.1111/mmi.13399

Lanyon-Hogg, T., Masumoto, N., Bodakh, G., Konitsiotis, A.D., Thinon, E., Rodgers, U.R., Owens, R.J., Magee, A.I., Tate, E.W., (2016) "Synthesis and characterisation of 5-acyl-6,7-dihydrothieno[3,2-c]pyridine inhibitors of Hedgehog acyltransferase".  Data Brief. 2016 Feb 10;7:257-81.

Bayley, C.P., Ruiz Nivia, H.D., Dajani, R., Jowitt, T.A., Collins, R.F., Rada, H., Bird, L.E., Baldock, C., (2016) "Diversity between mammalian tolloid proteinases: Oligomerisation and non-catalytic domains influence activity and specificity". Sci Rep. 2016 Feb 23;6:21456

Roatsch, M., Robaa, D., Pippel, M., Nettleship, J.E., Reddivari, Y., Bird, L.E., Hoffmann, I., Franz, H., Owens, R.J., Schüle, R., Flaig, R., Sippl, W., Jung, M., (2016) "Substituted 2-(2-aminopyrimidin-4-yl)pyridine-4-carboxylates as potent inhibitors of JumonjiC domain-containing histone demethylases". Future Med Chem. 2016 Mar 14.

Ren, J., Nettleship, J.E., Males, A., Stuart, D.I., Owens, R.J., (2016) "Crystal structures of penicillin-binding protein 3 in complexes with azlocillin and cefoperazone in both acylated and deacylated forms". FEBS Lett. 2016 Jan; 590(2):288-97

Asiani, K.R., Williams, H., Bird, L., Jenner, M., Searle, M.S., Hobman., J.L., Scott, D.J. and Soultanas, P., (2016),  "SilE is an intrinsically disordered periplasmic “molecular sponge” involved in bacterial silver resistance". Molecular Microbiology. doi:10.1111/mmi.13399

"Lanyon-Hogg, T.,  Masumoto, N.,  Bodakh, G., Konitsiotis, A.D.,  Thinon, E., Rodgers, U.R., Owens, R.J,. Magee, A.I., Tate, E.W., (2016)  ""Synthesis and characterisation of 5-acyl-6,7-dihydrothieno[3,2-c]pyridine inhibitors of Hedgehog acyltransferase""
Data Brief. 2016 Feb 10;7:257-81."

Bayley, C.P., Ruiz, Nivia, H.D., Dajani, R., Jowitt, T.A., Collins, R.F., Rada, H., Bird, L.E., Baldock, C., (2016) "Diversity between mammalian tolloid proteinases: Oligomerisation and non-catalytic domains influence activity and specificity". Sci Rep. 23;6:21456

Roatsch, M., Robaa, D., Pippel, M., Nettleship, J.E., Reddivari, Y., Bird, L.E., Hoffmann, I., Franz, H., Owens, R.J., Schüle, R., Flaig, R., Sippl, W., Jung, M., (2016) Substituted 2-(2-aminopyrimidin-4-yl)pyridine-4-carboxylates as potent inhibitors of JumonjiC domain-containing histone demethylases. Future Med Chem.

Ren, J., Nettleship, J.E., Males, A., Stuart, D.I., Owens, R.J., (2016) "Crystal structures of penicillin-binding protein 3 in complexes with azlocillin and cefoperazone in both acylated and deacylated forms". FEBS Lett. 2016 Jan;590(2):288-97

Qiu, H.,   Gao, Y.,   Boott, C.E.,  Gould, O.E.C.,  Harniman, R.L.,  Miles, M.J.,  Webb, S.E.D., Winnik, M.A.,  Manners, I.,  (2016) "Uniform patchy and hollow rectangular platelet micelles from crystallizable polymer blends" Science, • VOL 352 ISSUE 6286 697

Benjamin C. Coles, Stephen E. D. Webb, Noah Schwartz, Daniel J. Rolfe, Marisa Martin-Fernandez, and Valentina Lo Schiavo (2016) “Characterisation of the effects of optical aberrations in single molecule techniques” Biomedical Optics Express, Vol. 7, ISSUE 5, 1755-1767

BoKim, T., Yue, S., Zang, Z, Jones, E., Jones, J.R., Lee, P.D.,  (2014)  “Additive manufactured porous titanium structures: through-process quantification of pore and strut networks”, J. Mat. Proc. Tech., 214,  2706-15.

Evans, R.M., Brooke, E.J., Wehlin, S.A.M., Nomerotskaia, E., Sargent, F., Carr, S.B., Phillips, S.E.V.P. and Armstrong, F.A. (2016) "Mechanism of hydrogen activation by [NiFe] hydrogenases" Nature Chem. Biol. 12, 46-50.

Carr, S.B., Phillips, S.E.V.P. and Thomas, C.D. (2016) "Structures of replication initiation proteins from staphylococcal antibiotic resistance plasmids reveal protein asymmetry and flexibility are necessary for replication" Nucleic Acids Research, 44, 2417-2428.

Carr, S.B., Evans, R.M., Brooke, E.J., Wehlin, S.A.M., Nomerotskaia, E., Sargent, F., Armstrong, F.A. and Phillips, S.E.V."Hydrogen activation by [NiFe]-hydrogenases" Biochem Soc. Trans. Accepted

Punekar, A.S., Porter, J., Carr, S.B. and Phillips, S.E.V. (2016) "Structural basis for DNA recognition by the transcription regulator MetR" Acta crystallographica F, Accepted

Lobley, C.M.C., Sandy, J., Sanchez-Weatherby, J., Mazzorana, M., Krojer, T., Radoslaw, P.,  Nowak, R.P., Sorensen, T.L., (2016) “A Generic Protocol for Protein Crystal Dehydration using the HC1b Humidity Controller”, Acta Cryst D 72:629-40

Mazzorana, M., Hussain, R., Sorensen, T., (2016) “Ca-dependent Folding of Human Calumenin”, PLoS One 11:e 0151547

Wang, Y.Q., Spindler, M.W., Truman, C.E., et al. (2016) "Critical analysis of the prediction of stress relaxation from forward creep of Type 316H austenitic stainless steel[J]". Materials & Design, 95: 656-668.

Kaestner, A.P., Trtik, P., Zarebandkouki, M., Kazantsev, D., Snehota, M., Dobson, K.J. and Lehmann, E.H., 2015. "Recent developments in neutron imaging with applications for porous media research". Solid Earth Discussions, 7(4).

Vila-Comamala, J., Bosgra, J., Eastwood, D. S., Wagner, U., Bodey, A. J., Garcia-Fernandez, M., David, C. and Rau, C. (2016). "Transmission x-ray microscopy at Diamond-Manchester I13 Imaging Branchline" AIP Conference Proceedings 1696, 020036 DOI: http://dx.doi.org/doi:http://dx.doi.org/10.1063/1.4937530

Kondrat, S.A.,  Smith, P.J.,  Wells P.P.,  Chater, P.A.,  Carter, J.H.,  Morgan, D.J., Fiordaliso, E.M.,  Wagner, J.B.,  Davies, T.E.,  Lu, L.,  Bartley, J.K.,  Taylor, S.H., Spencer, M.S.,  Kiely, C.J.,  Kelly, G.J.,  Park, C.W.,  Rosseinsky, M.J.,  & Hutchings, G.J., (2016)  ""Stable amorphous georgeite as a precursor to a high-activity""  catalystdoi: 10.1038/nature 16935